STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLNBfilamin-B-like. (1799 aa)    
Predicted Functional Partners:
itgb6
Integrin subunit beta 6.
    
 0.894
LOC115023125
Integrin beta-1-like.
    
 0.894
itgb1
Integrin subunit beta 1.
    
 0.894
itgb8
Integrin subunit beta 8.
    
 0.893
fblim1
Filamin binding LIM protein 1.
   
 0.893
itgb4
Integrin subunit beta 4.
    
 0.887
itgb5
Integrin subunit beta 5.
    
 0.884
LOC115026146
Integrin beta-2-like.
    
 0.825
LOC115024258
Integrin beta-3-like.
    
 0.822
LOC115012144
Integrin beta-3-like.
    
 0.822
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.