STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbd2methyl-CpG binding domain protein 2. (266 aa)    
Predicted Functional Partners:
mta3
Metastasis associated 1 family member 3.
   
 0.909
mta2
Metastasis associated 1 family member 2.
   
 0.909
LOC115027378
Metastasis-associated protein MTA1-like.
   
 0.909
LOC115027462
Histone-binding protein RBBP4.
    
 0.882
RBBP4
Histone-binding protein RBBP4-like.
    
 0.882
LOC115026072
Histone-binding protein RBBP7.
    
 0.882
LOC115022964
Transcriptional repressor p66 alpha-like.
   
 0.862
gatad2a
GATA zinc finger domain containing 2A.
   
 0.862
gatad2b
GATA zinc finger domain containing 2B.
   
 0.862
LOC115016094
Probable histone deacetylase 1-B.
    
 0.849
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.