STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115004781Tryptophan 5-hydroxylase 2. (466 aa)    
Predicted Functional Partners:
ENSCGOP00000019156
Pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha.
  
 0.965
PCBD2
Pterin-4-alpha-carbinolamine dehydratase 2-like.
  
 0.965
got2
Glutamic-oxaloacetic transaminase 2.
  
 
 0.882
qdpr
Quinoid dihydropteridine reductase.
   
 0.880
tdo2
Tryptophan 2,3-dioxygenase.
  
 
 0.867
LOC115013739
Indoleamine 2,3-dioxygenase 2-like.
   
 
 0.864
tat
Tyrosine aminotransferase.
   
 
 0.863
LOC115020208
Indoleamine 2,3-dioxygenase 2-like.
   
 
 0.863
hgd
Homogentisate 1,2-dioxygenase.
  
  
 0.852
ddc
Dopa decarboxylase.
   
 0.841
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.