STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000028250Zgc:158404. (272 aa)    
Predicted Functional Partners:
rbpms2
RNA binding protein, mRNA processing factor 2.
      
 0.533
ccdc186
Coiled-coil domain containing 186.
      
 0.449
LOC115024264
Beta-tectorin-like.
      
 0.448
zdhhc6
Zinc finger DHHC-type containing 6.
      
 0.448
nhlrc2
NHL repeat containing 2.
      
 0.448
LOC115014410
Leptin receptor overlapping transcript-like 1.
      
 0.443
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.426
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.