STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prmt1Protein arginine methyltransferase 1. (364 aa)    
Predicted Functional Partners:
rps2
Ribosomal protein S2.
   
 0.892
foxo3
Forkhead box O3.
    
 0.864
LOC115014894
Forkhead box protein O4-like.
    
 0.864
LOC115019246
Forkhead box protein O1-A-like.
    
 0.864
LOC115017485
Forkhead box protein O1-A-like.
    
 0.864
LOC115015775
Forkhead box protein O6-like.
    
  0.857
LOC115021873
Forkhead box protein O3-like.
    
  0.857
LOC115004881
Forkhead box protein O3-like.
    
 0.837
tsr1
TSR1 ribosome maturation factor.
   
  0.814
nhp2
NHP2 ribonucleoprotein.
   
 0.804
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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