STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lama4Laminin subunit alpha 4. (1877 aa)    
Predicted Functional Partners:
lamb3
Laminin subunit beta 3.
   
0.912
LOC115017050
Laminin subunit gamma-3-like.
   
0.897
ENSCGOP00000032811
annotation not available
   
 0.896
ENSCGOP00000032816
annotation not available
   
 0.896
LOC115014266
Malate synthase, glyoxysomal-like.
   
 
 0.881
ITGA7
Integrin subunit alpha 7.
    
 0.854
itgb4
Integrin subunit beta 4.
   
 0.847
itga4
Integrin subunit alpha 4.
    
 0.844
itga8
Integrin subunit alpha 8.
    
 0.844
LOC115023125
Integrin beta-1-like.
    
 0.836
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.