STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000032719annotation not available (106 aa)    
Predicted Functional Partners:
rhbdl3
Rhomboid like 3.
    
  0.607
wdr18
WD repeat domain 18.
   
 0.591
tex10
Testis expressed 10.
   
 0.578
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.573
PTK7
Protein tyrosine kinase 7 (inactive).
   
  0.572
ripk4
Receptor interacting serine/threonine kinase 4.
   
 0.534
LOC115003517
Receptor-interacting serine/threonine-protein kinase 3-like.
   
 0.534
ENSCGOP00000019554
annotation not available
   
  0.532
ENSCGOP00000019559
annotation not available
   
  0.532
LOC115021008
H-2 class II histocompatibility antigen, A-U alpha chain-like.
   
  0.523
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.