STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl17Ribosomal protein L17. (197 aa)    
Predicted Functional Partners:
rps6
Ribosomal protein S6.
   
 
 0.999
rps10
Ribosomal protein S10.
   
 
 0.999
rack1
Receptor for activated C kinase 1.
   
 
 0.999
rps24
Ribosomal protein S24.
   
 
 0.999
rps11
Ribosomal protein S11.
  
 
 0.999
RPS20
Ribosomal protein S20.
  
 
 0.999
rpl14
Ribosomal protein L14.
  
 0.999
rps26
Ribosomal protein S26.
   
 
 0.999
rpl8
Ribosomal protein L8.
  
 0.999
rpl28
Ribosomal protein L28.
   
 0.999
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.