STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115012492Serine/threonine-protein kinase BRSK2-like. (740 aa)    
Predicted Functional Partners:
prmt5
Protein arginine methyltransferase 5.
    
 0.933
cdc25b
Cell division cycle 25B.
    
 
 0.906
wee1
WEE1 G2 checkpoint kinase.
   
0.875
pkmyt1
Protein kinase, membrane associated tyrosine/threonine 1.
   
0.875
LOC115009895
Wee1-like protein kinase 2.
   
0.875
LOC115009801
Nucleosome assembly protein 1-like 4.
   
 
 0.702
nap1l1
Nucleosome assembly protein 1 like 1.
    
 
 0.702
cdc23
Cell division cycle 23.
    
   0.695
hspb11
Heat shock protein family B (small) member 11.
    
   0.685
auts2
Activator of transcription and developmental regulator AUTS2.
    
 
 0.678
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.