STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115022286Elongation factor 2. (862 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.998
rplp0
Ribosomal protein lateral stalk subunit P0.
  
 0.995
LOC115011839
40S ribosomal protein SA.
  
 0.995
rps2
Ribosomal protein S2.
  
 0.994
rpl4
Ribosomal protein L4.
  
 0.994
rpl8
Ribosomal protein L8.
  
 0.993
rps3
Ribosomal protein S3.
  
 0.993
RPL7A
Ribosomal protein L7a.
  
 0.993
rps6
Ribosomal protein S6.
   
 0.992
rack1
Receptor for activated C kinase 1.
   
 
 0.992
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.