STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115026838Neuropilin-2-like. (939 aa)    
Predicted Functional Partners:
atp7a
ATPase copper transporting alpha.
  
 
 0.729
LOC115021136
Copper-transporting ATPase 2-like.
  
 
 0.729
aasdh
Aminoadipate-semialdehyde dehydrogenase.
     
 0.718
pros1
Protein S.
   
 0.715
LOC115021228
Solute carrier family 40 member 1-like.
    
 0.707
slc40a1
Solute carrier family 40 member 1.
    
 0.707
fech
Ferrochelatase.
   
 
 0.704
ENSCGOP00000016416
Frataxin.
     
 0.673
pex12
Peroxisomal biogenesis factor 12.
    
 
 0.671
LOC115008864
Cytochrome c1, heme protein, mitochondrial.
     
 0.638
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.