STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000036300annotation not available (455 aa)    
Predicted Functional Partners:
ENSCGOP00000023500
annotation not available
  
 0.911
LOC115008125
Tubulin beta-6 chain-like.
 
0.899
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
   
 
 0.886
wdr90
WD repeat domain 90.
   
  0.872
LOC115018216
Serine/threonine-protein kinase DCLK1-like.
   
 
 0.862
dclk1
Doublecortin like kinase 1.
   
 
 0.862
LOC115020933
Tubulin beta chain-like.
  
0.857
ENSCGOP00000009539
annotation not available
  
0.857
ENSCGOP00000022239
annotation not available
  
0.855
ENSCGOP00000022261
annotation not available
  
0.855
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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