STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acbd3acyl-CoA binding domain containing 3. (544 aa)    
Predicted Functional Partners:
pi4kb
Phosphatidylinositol 4-kinase beta.
    
 
 0.922
LOC115005241
Phosphatidylinositol 4-kinase beta-like.
    
 
 0.922
blzf1
Basic leucine zipper nuclear factor 1.
    
 
 0.783
cttn
Cortactin.
    
 0.778
ENSCGOP00000004435
annotation not available
    
 0.778
ENSCGOP00000035608
Golgin B1.
    
 0.778
LOC115028265
Src substrate cortactin-like.
    
 0.778
ENSCGOP00000000218
annotation not available
    
 0.756
tbc1d22b
TBC1 domain family member 22B.
    
 
 0.682
tbc1d22a
TBC1 domain family member 22A.
    
 
 0.682
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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