STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115017011Ankycorbin-like. (985 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81.
    
 0.696
rps3
Ribosomal protein S3.
    
 0.643
LOC115017458
Transcription factor RelB-like.
   
 0.632
LOC115023463
Transcription factor p65-like.
   
 0.632
ift22
Intraflagellar transport 22.
    
 0.618
LOC115014396
F-box/WD repeat-containing protein 11-like.
    
 0.612
traf7
TNF receptor associated factor 7.
    
  0.611
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.611
LOC115024640
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
    
 0.611
LOC115019941
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
    
 0.611
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.