STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115022612Voltage-dependent R-type calcium channel subunit alpha-1E-like. (2011 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.998
wdr35
WD repeat domain 35.
    
 0.822
IFT122
Intraflagellar transport 122.
   
 0.818
ift140
Intraflagellar transport 140.
    
 0.809
rasgrp3
RAS guanyl releasing protein 3.
   
 
  0.809
RASGRP2
RAS guanyl releasing protein 2.
   
 
  0.809
LOC115012513
Voltage-dependent calcium channel gamma-1 subunit-like.
   
 0.805
cacng1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
 0.805
LOC115013794
Ras-specific guanine nucleotide-releasing factor 2.
   
 
  0.787
LOC115020976
Sodium channel subunit beta-1-like.
    
 0.779
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.