STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pi4kaPhosphatidylinositol 4-kinase alpha. (2040 aa)    
Predicted Functional Partners:
SACM1L
Phosphatidylinositide phosphatase SAC1-B-like.
    
 0.942
sacm1l
SAC1 like phosphatidylinositide phosphatase.
    
 0.942
ENSCGOP00000019104
Tetratricopeptide repeat domain 7A.
    
 
 0.909
ttc7b
Tetratricopeptide repeat domain 7B.
    
 
 0.909
fam126a
Family with sequence similarity 126 member A.
    
 
 0.908
pi4kb
Phosphatidylinositol 4-kinase beta.
    
0.900
LOC115005241
Phosphatidylinositol 4-kinase beta-like.
    
0.900
pcsk9
Proprotein convertase subtilisin/kexin type 9.
    
 0.898
LOC115013378
Phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like.
   
 0.874
LOC115017167
Phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like.
   
 0.874
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.