STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000040488annotation not available (123 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.602
il1b
Interleukin 1 beta.
   
  0.528
LOC115012729
Hepatoma-derived growth factor-related protein 2-like.
  
  
  0.522
hgfac
HGF activator.
    
  0.521
habp2
Hyaluronan binding protein 2.
    
  0.521
mre11
MRE11 homolog, double strand break repair nuclease.
    
 0.519
cd79a
CD79a molecule.
    
 0.507
rad50
RAD50 double strand break repair protein.
    
  0.497
cd79b
CD79b molecule.
   
  0.496
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.493
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.