STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pold3DNA polymerase delta 3, accessory subunit. (456 aa)    
Predicted Functional Partners:
pold1
DNA polymerase delta 1, catalytic subunit.
    
 0.996
pold2
DNA polymerase delta 2, accessory subunit.
   
 0.996
pcna
Proliferating cell nuclear antigen.
   
 0.985
rev3l
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 0.984
mad2l2
Mitotic arrest deficient 2 like 2.
    
 
 0.975
LOC115012285
Glycogen [starch] synthase, muscle-like.
   
 0.942
gys2
Glycogen synthase 2.
   
 0.942
gbe1
1,4-alpha-glucan branching enzyme 1.
   
 0.932
pola1
DNA polymerase alpha 1, catalytic subunit.
    
 0.880
pole
DNA polymerase epsilon, catalytic subunit.
    
 0.876
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.