STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdcHistidine decarboxylase. (662 aa)    
Predicted Functional Partners:
LOC115025093
Delta-1-pyrroline-5-carboxylate synthase-like.
    
 0.890
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase-like.
    
 0.890
th
Tyrosine hydroxylase.
   
 0.886
LOC115028288
Tyrosine 3-monooxygenase-like.
   
 0.886
pah
Phenylalanine hydroxylase.
   
 0.884
eprs1
glutamyl-prolyl-tRNA synthetase 1.
    
 0.882
tat
Tyrosine aminotransferase.
  
 
 0.864
LOC115016999
Probable flavin-containing monoamine oxidase A.
    
 0.862
LOC115026664
Amine oxidase [flavin-containing].
    
 0.862
aadat
Aminoadipate aminotransferase.
    
 0.857
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.