STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000046336annotation not available (153 aa)    
Predicted Functional Partners:
dcp1b
Decapping mRNA 1B.
    
 0.769
klhl24
Kelch like family member 24.
   
  
 0.460
LOC115003519
Zinc-binding protein A33-like.
      
 0.449
LOC115021244
Probable ATP-dependent RNA helicase ddx6.
    
 0.422
LOC115015501
Probable ATP-dependent RNA helicase DDX6.
    
 0.422
eif4a3
Eukaryotic translation initiation factor 4A3.
    
  0.412
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.