STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc20Leucine rich repeat containing 20. (170 aa)    
Predicted Functional Partners:
LOC115019041
Adhesion G protein-coupled receptor L3-like.
    
   0.773
LOC115008257
Adhesion G protein-coupled receptor L1-like.
    
   0.773
adgrl2
Adhesion G protein-coupled receptor L2.
    
   0.773
ADGRL3
Adhesion G protein-coupled receptor L3-like.
    
   0.773
LOC115022072
Adhesion G protein-coupled receptor L2-like.
    
   0.773
LOC115011665
Adhesion G protein-coupled receptor L1-like.
    
   0.773
LOC115025633
netrin-G1-like.
    
 0.756
ENSCGOP00000021639
annotation not available
    
 0.756
LOC115021958
netrin-G1-like.
    
 0.756
ENSCGOP00000034212
annotation not available
  
   
 0.649
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.