STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115027142E3 ubiquitin-protein ligase MSL2-like. (618 aa)    
Predicted Functional Partners:
msl1
MSL complex subunit 1.
    
 0.979
MSL3
MSL complex subunit 3.
    
 0.978
LOC115011876
Histone acetyltransferase KAT7-like.
    
 0.853
kat7
Lysine acetyltransferase 7.
    
 0.853
kat8
Lysine acetyltransferase 8.
    
 0.853
kat5
Lysine acetyltransferase 5.
    
 0.853
kat6a
Lysine acetyltransferase 6A.
    
 0.853
kat6b
Lysine acetyltransferase 6B.
    
 0.853
sod2
Superoxide dismutase 2.
  
 0.806
ENSCGOP00000000501
annotation not available
    
 0.805
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.