STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115016827Carboxypeptidase B2-like. (418 aa)    
Predicted Functional Partners:
LOC115005338
Coagulation factor X-like.
  
 
 0.970
LOC115005340
Coagulation factor VII-like.
  
 
 0.846
C8A
Complement C8 alpha chain.
   
  
 0.820
LOC115004955
Prothrombin-like.
  
 0.745
LOC115004947
Prothrombin-like.
  
 0.745
c3
Complement C3.
   
 0.659
LOC115005355
Coagulation factor VII-like.
  
 
 0.651
ENSCGOP00000052682
Angiotensinogen.
   
 
  0.626
lxn
Latexin.
    
 
 0.617
plg
Plasminogen.
  
 
 0.599
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.