STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsr1TSR1 ribosome maturation factor. (836 aa)    
Predicted Functional Partners:
bysl
Bystin like.
   
 0.999
riok2
RIO kinase 2.
   
 0.999
rps6
Ribosomal protein S6.
    
  0.998
rps2
Ribosomal protein S2.
    
 0.998
dimt1
DIMT1 rRNA methyltransferase and ribosome maturation factor.
   
 
 0.998
rrp12
Ribosomal RNA processing 12 homolog.
   
 
 0.998
rps9
Ribosomal protein S9.
   
 0.998
rps7
Ribosomal protein S7.
    
  0.998
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
 0.997
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 0.995
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.