STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115024566Dual specificity protein phosphatase 13-like. (188 aa)    
Predicted Functional Partners:
vrk3
VRK serine/threonine kinase 3.
    
 0.677
inppl1
Inositol polyphosphate phosphatase like 1.
   
 
 0.670
LOC115014723
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2B-like.
   
 
 0.670
mapk8
Mitogen-activated protein kinase 8.
   
 0.652
LOC115015104
Mitogen-activated protein kinase 9-like.
   
 0.652
LOC115016627
Mitogen-activated protein kinase 10.
   
 0.652
LOC115024543
Mitogen-activated protein kinase 8.
   
 0.652
LOC115007966
Mitogen-activated protein kinase 14A.
   
 0.622
LOC115011084
Mitogen-activated protein kinase 13-like.
   
 0.622
LOC115012254
Mitogen-activated protein kinase 1-like.
   
 0.622
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.