STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
colec11Collectin subfamily member 11. (272 aa)    
Predicted Functional Partners:
COLEC12
Collectin subfamily member 12.
  
  
 
0.855
LOC115022361
Collectin-12-like.
  
  
 
0.798
ENSCGOP00000003337
annotation not available
    
 0.741
LOC115021684
Mannan-binding lectin serine protease 2-like.
    
 0.741
ENSCGOP00000005133
annotation not available
    
 0.741
ENSCGOP00000005147
annotation not available
    
 0.741
LOC115005685
Complement C1r-B subcomponent-like.
    
 0.741
masp1
Mannan binding lectin serine peptidase 1.
    
 0.741
ENSCGOP00000047070
annotation not available
    
 0.741
ENSCGOP00000001058
annotation not available
   
 
0.708
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.