STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsph14Radial spoke head 14 homolog. (342 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
   0.851
cfap52
Cilia and flagella associated protein 52.
   
 
 0.836
ankef1
Ankyrin repeat and EF-hand domain containing 1.
   
   0.835
ccdc65
Coiled-coil domain containing 65.
   
 
 0.779
iqcg
IQ motif containing G.
   
    0.778
pacrg
Parkin coregulated.
   
 
 0.724
dnali1
Dynein axonemal light intermediate chain 1.
   
 
 0.708
wsb1
WD repeat and SOCS box containing 1.
   
 
 0.707
wsb2
WD repeat and SOCS box containing 2.
   
 
 0.707
poc1b
POC1 centriolar protein B.
   
 
 0.707
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.