STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atxn10Ataxin 10. (486 aa)    
Predicted Functional Partners:
ENSCGOP00000006317
annotation not available
    
 
 0.556
NPHP4
Nephrocystin 4.
      
 0.510
cdpf1
Cysteine rich DPF motif domain containing 1.
      
 0.497
LOC115025943
Probable ubiquitin carboxyl-terminal hydrolase FAF-X.
    
 
 0.494
c13h19orf54
Chromosome 13 C19orf54 homolog.
      
 0.483
atxn2
Ataxin 2.
   
  
 0.467
ENSCGOP00000024512
annotation not available
      
 0.444
bean1
Brain expressed associated with NEDD4 1.
      
 0.441
C8orf37
Chromosome 16 C8orf37 homolog.
      
 0.440
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.