STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lemd3LEM domain containing 3. (860 aa)    
Predicted Functional Partners:
LOC115019295
Barrier-to-autointegration factor.
   
 0.915
LOC115019294
Barrier-to-autointegration factor-like.
   
 0.915
LOC115027490
RNA-binding protein 25-like.
   
 0.842
LOC115003642
RNA-binding protein 25-like.
   
 0.842
smad2
SMAD family member 2.
   
 
 0.825
LOC115005681
Mothers against decapentaplegic homolog 3.
   
 
 0.825
smad3
SMAD family member 3.
   
 
 0.825
LOC115014050
Mothers against decapentaplegic homolog 2.
   
 
 0.825
LOC115014051
Mothers against decapentaplegic homolog 2.
   
 
 0.825
lmna
Lamin A/C.
    
 0.821
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.