STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKP4Plakophilin 4. (1211 aa)    
Predicted Functional Partners:
ctnna2
Catenin alpha 2.
   
 0.880
ctnna1
Catenin alpha 1.
   
 0.880
ctnnb1
Catenin beta 1.
    
 0.864
mst1r
Macrophage stimulating 1 receptor.
   
 0.836
LOC115007953
Macrophage-stimulating protein receptor-like.
   
 0.836
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.836
LOC115012554
Junction plakoglobin-like.
   
 0.815
LOC115011849
Junction plakoglobin-like.
   
 0.815
cdh5
Cadherin 5.
    
 0.806
LOC115020335
B-cadherin-like.
    
 0.803
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.