Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSLBEP00000035061 | acod1 | ENSLBEP00000035061 | ENSLBEP00000034693 | Immunoresponsive gene 1, like. | Aconitate decarboxylase 1. | 0.843 |
ENSLBEP00000035061 | dao | ENSLBEP00000035061 | ENSLBEP00000001350 | Immunoresponsive gene 1, like. | D-amino-acid oxidase, tandem duplicate 2. | 0.738 |
ENSLBEP00000035061 | ddo | ENSLBEP00000035061 | ENSLBEP00000006358 | Immunoresponsive gene 1, like. | Zgc:172341. | 0.738 |
ENSLBEP00000035061 | pyroxd1 | ENSLBEP00000035061 | ENSLBEP00000000392 | Immunoresponsive gene 1, like. | Pyridine nucleotide-disulphide oxidoreductase domain 1. | 0.863 |
LOC109987455 | fdx1 | ENSLBEP00000033214 | ENSLBEP00000005495 | Cytochrome b5 reductase 4. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.915 |
LOC109987455 | fdx2 | ENSLBEP00000033214 | ENSLBEP00000027499 | Cytochrome b5 reductase 4. | Ferredoxin 2. | 0.915 |
LOC109987455 | pyroxd1 | ENSLBEP00000033214 | ENSLBEP00000000392 | Cytochrome b5 reductase 4. | Pyridine nucleotide-disulphide oxidoreductase domain 1. | 0.904 |
LOC109987455 | suox | ENSLBEP00000033214 | ENSLBEP00000021696 | Cytochrome b5 reductase 4. | Sulfite oxidase. | 0.938 |
acod1 | ENSLBEP00000035061 | ENSLBEP00000034693 | ENSLBEP00000035061 | Aconitate decarboxylase 1. | Immunoresponsive gene 1, like. | 0.843 |
acod1 | dao | ENSLBEP00000034693 | ENSLBEP00000001350 | Aconitate decarboxylase 1. | D-amino-acid oxidase, tandem duplicate 2. | 0.738 |
acod1 | ddo | ENSLBEP00000034693 | ENSLBEP00000006358 | Aconitate decarboxylase 1. | Zgc:172341. | 0.738 |
acod1 | pyroxd1 | ENSLBEP00000034693 | ENSLBEP00000000392 | Aconitate decarboxylase 1. | Pyridine nucleotide-disulphide oxidoreductase domain 1. | 0.863 |
dao | ENSLBEP00000035061 | ENSLBEP00000001350 | ENSLBEP00000035061 | D-amino-acid oxidase, tandem duplicate 2. | Immunoresponsive gene 1, like. | 0.738 |
dao | acod1 | ENSLBEP00000001350 | ENSLBEP00000034693 | D-amino-acid oxidase, tandem duplicate 2. | Aconitate decarboxylase 1. | 0.738 |
dao | pipox | ENSLBEP00000001350 | ENSLBEP00000033517 | D-amino-acid oxidase, tandem duplicate 2. | Pipecolic acid oxidase. | 0.879 |
dao | pyroxd1 | ENSLBEP00000001350 | ENSLBEP00000000392 | D-amino-acid oxidase, tandem duplicate 2. | Pyridine nucleotide-disulphide oxidoreductase domain 1. | 0.863 |
dao | suox | ENSLBEP00000001350 | ENSLBEP00000021696 | D-amino-acid oxidase, tandem duplicate 2. | Sulfite oxidase. | 0.561 |
ddo | ENSLBEP00000035061 | ENSLBEP00000006358 | ENSLBEP00000035061 | Zgc:172341. | Immunoresponsive gene 1, like. | 0.738 |
ddo | acod1 | ENSLBEP00000006358 | ENSLBEP00000034693 | Zgc:172341. | Aconitate decarboxylase 1. | 0.738 |
ddo | pipox | ENSLBEP00000006358 | ENSLBEP00000033517 | Zgc:172341. | Pipecolic acid oxidase. | 0.897 |
page 1 of 3