STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ss18l2Ss18, like 2. (102 aa)    
Predicted Functional Partners:
ENSLBEP00000012581
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 
 0.752
smarce1
HMG box domain-containing protein.
   
 
 0.752
bcl7a
BAF chromatin remodeling complex subunit BCL7A.
    
 
 0.718
bcl7b
BAF chromatin remodeling complex subunit BCL7B b.
    
 
 0.718
phf10
PHD finger protein 10.
    
 
 0.710
LOC109995070
Actin-like 6A; Belongs to the actin family.
    
 
 0.688
arid2
AT rich interactive domain 2 (ARID, RFX-like).
    
 
 0.654
cramp1
Cramped chromatin regulator homolog 1.
    
   0.646
brd7
Bromodomain containing 7.
   
 
 0.642
brd9
Bromodomain containing 9.
   
 
 0.642
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.