STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109992298ANTXR cell adhesion molecule 1c. (490 aa)    
Predicted Functional Partners:
LOC109986297
Anthrax toxin receptor; Belongs to the ATR family.
  
0.869
ANTXR1
ANTXR cell adhesion molecule 1.
  
  
 
0.832
LOC110003405
VWFA domain-containing protein.
   
0.771
ENSLBEP00000011796
C-type lectin domain-containing protein.
    
 0.741
LOC109981210
ANTXR cell adhesion molecule 1b.
  
0.733
ENSLBEP00000033866
Uncharacterized protein.
   
  0.712
LOC109983404
Im:7152348.
   
 0.651
ENSLBEP00000011618
Tudor domain-containing protein.
    
 0.648
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.648
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.646
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.