STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp37Ubiquitin carboxyl-terminal hydrolase. (907 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
 0.855
ENSLBEP00000013035
VHS domain-containing protein.
    
 0.849
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 0.849
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 0.849
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
 0.828
LOC109976847
Ubiquitin-like domain-containing protein.
    
 0.780
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.780
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
     
 0.775
ENSLBEP00000005272
Uncharacterized protein.
    
 0.736
LOC109981436
Uncharacterized protein.
    
 0.736
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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