STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109997380Peptidylprolyl isomerase. (456 aa)    
Predicted Functional Partners:
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.944
LOC109982952
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.944
LOC109982928
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.944
stip1
Stress-induced phosphoprotein 1.
   
 0.923
LOC109994777
Prostaglandin E synthase 3a (cytosolic).
   
 0.921
ptges3
Prostaglandin E synthase 3b (cytosolic).
   
 0.921
ENSLBEP00000010675
Uncharacterized protein.
   
 0.872
LOC109985666
TSC complex subunit 1b.
   
 0.872
trap1
TNF receptor-associated protein 1.
   
 0.872
LOC109994498
Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).
    
 0.864
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.