STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110002251PNPLA domain-containing protein. (238 aa)    
Predicted Functional Partners:
LOC109976169
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.855
LOC109986569
Retinoid isomerohydrolase RPE65 b.
     
 0.850
rpe65
Retinoid isomerohydrolase RPE65 a.
     
 0.850
LOC109999293
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.848
ENSLBEP00000009197
Si:ch211-107o10.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.848
LOC110003058
Si:dkey-23o4.6; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.848
LOC110003059
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.848
rdh10
Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.845
dhrs3
Dehydrogenase/reductase (SDR family) member 3b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.845
LOC109981971
Zgc:112332; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.841
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.