STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109991694Fibrinogen-like 2a. (456 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
   
 
  0.681
mst1r
Macrophage stimulating 1 receptor b.
   
 
  0.681
LOC109980643
Macrophage stimulating 1 receptor a.
   
 
  0.681
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.583
matn1
Matrilin 1.
   
 0.557
ENSLBEP00000016582
VWFA domain-containing protein.
   
 0.557
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
  0.542
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.534
fbln5
Fibulin 5.
   
 0.532
mcrs1
Microspherule protein 1.
    
 0.514
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.