STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000001176Polycystic kidney disease 1b. (3080 aa)    
Predicted Functional Partners:
pkd2
Polycystic kidney disease 2.
    
 0.945
LOC109999425
Polycystic kidney disease 2-like 1.
    
 0.944
LOC109984293
Myotilin.
    
 0.867
ccdc25
Coiled-coil domain containing 25.
    
 0.780
LOC109994487
Uncharacterized protein.
    
0.780
LOC109975490
Uncharacterized protein.
    
0.780
exoc5
Exocyst complex component 5.
     
 0.714
exoc4
Exocyst complex component 4.
     
 0.660
ENSLBEP00000010073
Uncharacterized protein.
     
 0.590
exoc6
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.590
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.