STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcc10ATP-binding cassette, sub-family C (CFTR/MRP), member 10. (1553 aa)    
Predicted Functional Partners:
LOC110004529
Uncharacterized protein.
 
   
 0.817
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
  
0.736
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.694
ak9
Adenylate kinase 9.
  
  0.674
gopc
Golgi-associated PDZ and coiled-coil motif containing.
   
 0.631
usp10
Ubiquitin carboxyl-terminal hydrolase.
    
  0.630
hsdl2
Hydroxysteroid dehydrogenase like 2.
   
 0.628
ENSLBEP00000004591
NDK domain-containing protein.
  
 0.626
ENSLBEP00000030295
annotation not available
  
 0.626
acaca
Acetyl-CoA carboxylase alpha.
 
 0.623
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.