STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109987064Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a. (300 aa)    
Predicted Functional Partners:
LOC109989542
CREB binding protein a.
    
 0.925
LOC109994130
CREB binding protein b.
    
 0.925
ep300
E1A binding protein p300 a.
    
 0.911
ENSLBEP00000022272
TAZ-type domain-containing protein.
    
 0.911
LOC110004120
E1A binding protein p300 b.
    
 0.911
ENSLBEP00000034873
Uncharacterized protein.
    
 0.796
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
    
 0.759
LOC109978071
Fork-head domain-containing protein.
     
 0.671
LOC109976849
Forkhead box O1 a.
     
 0.671
LOC109985476
Forkhead box O4.
     
 0.671
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.