STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110000366Peptidoglycan recognition protein 5. (167 aa)    
Predicted Functional Partners:
LOC110006067
Uncharacterized protein.
  
 
0.876
ENSLBEP00000011687
PGRP domain-containing protein.
  
 
0.875
LOC109989533
PALP domain-containing protein.
   
 0.709
SDS
Serine dehydratase.
   
 0.709
LOC109998584
Si:ch73-263o4.3.
   
 0.709
LOC109992127
Serine dehydratase-like.
   
 0.709
LOC110001026
Phosphatidylinositol glycan anchor biosynthesis, class U.
     
 0.697
LOC110005465
Phosphatidylinositol glycan anchor biosynthesis class U protein-like.
     
 0.697
ppt2
Palmitoyl-protein thioesterase 2.
    
 0.692
ugcg
UDP-glucose ceramide glucosyltransferase.
   
 0.689
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.