STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109992831Kirre like nephrin family adhesion molecule 1a. (605 aa)    
Predicted Functional Partners:
nphs1
NPHS1 adhesion molecule, nephrin.
   
0.974
nck2
Cytoplasmic protein.
    
 0.726
nck1
Cytoplasmic protein.
    
 0.726
LOC109982423
Tyrosine-protein kinase.
    
  0.560
ptk6
Tyrosine-protein kinase.
    
  0.560
ENSLBEP00000012879
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.560
ENSLBEP00000012891
SH3 domain-containing protein.
    
  0.560
fyn
Tyrosine-protein kinase.
    
  0.560
LOC109987579
Tyrosine-protein kinase.
    
  0.560
LOC109983007
Tight junction protein 1a; Belongs to the MAGUK family.
    
 0.517
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.