STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109992850Uncharacterized protein. (599 aa)    
Predicted Functional Partners:
nectin1
Nectin cell adhesion molecule 1b.
    
0.934
LOC109986402
Afadin, adherens junction formation factor a.
    
 0.924
LOC109996785
Uncharacterized protein.
    
 
0.873
LOC109977467
Ig-like domain-containing protein.
    
 
0.865
LOC109981419
Nectin cell adhesion molecule 3b.
    
 
0.865
ENSLBEP00000005622
Nectin cell adhesion molecule 4b.
  
  
 
0.845
PARD3
Par-3 family cell polarity regulator.
    
  0.841
nectin2
Si:ch73-22o12.1.
    
 
0.841
pard3
Par-3 family cell polarity regulator alpha, b.
    
  0.841
ENSLBEP00000014768
Ig-like domain-containing protein.
    
  0.832
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.