STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109996827IL6Ra-bind domain-containing protein. (336 aa)    
Predicted Functional Partners:
LOC109986803
Uncharacterized protein.
   
 
 0.843
LOC109992050
Fibronectin type-III domain-containing protein.
   
 
 0.841
ENSLBEP00000022120
Uncharacterized protein.
     
 0.839
il7r
Fibronectin type-III domain-containing protein.
   
 
  0.835
LOC109986302
Uncharacterized protein.
   
 
  0.835
LOC109993697
Interleukin 11a.
     
 0.829
LOC109983101
Signal transducer and activator of transcription.
   
 
  0.822
LOC109996950
Signal transducer and activator of transcription.
   
 
  0.822
LOC109994791
Signal transducer and activator of transcription.
   
 
  0.822
spi1
Spi-1 proto-oncogene b.
   
    0.805
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.