STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000001971Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
fjx1
Four-jointed box kinase 1.
   
 0.925
ENSLBEP00000002205
Si:dkey-1m11.5.
 
 
0.921
ENSLBEP00000002025
Uncharacterized protein.
 
    
0.911
ENSLBEP00000002069
Uncharacterized protein.
 
      0.900
ENSLBEP00000034996
Uncharacterized protein.
 
  
 0.867
LOC109995992
Limb and CNS expressed 1.
   
 0.785
LIX1L
Limb and CNS expressed 1 like.
   
 0.785
frmd6
FERM domain containing 6.
    
 0.751
LOC109983213
FERM domain containing 1.
    
 0.751
atn1
Atrophin 1.
    
 0.734
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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