STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000002067Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (142 aa)    
Predicted Functional Partners:
LOC109991839
WD repeat domain, phosphoinositide interacting 1.
   
 0.924
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.924
wipi2
WD repeat domain, phosphoinositide interacting 2.
   
 0.924
ENSLBEP00000001542
Autophagy related 2B.
   
 0.919
ATG2B
Autophagy related 2B.
   
 0.919
atg2a
Autophagy related 2A.
   
 0.919
atg13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
 0.908
ENSLBEP00000015535
Uncharacterized protein.
   
 0.908
LOC109987065
PDLIM1 interacting kinase 1 like; Belongs to the protein kinase superfamily.
   
 0.901
LOC109999289
Serine/threonine kinase 35, like; Belongs to the protein kinase superfamily.
   
 0.901
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.