STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109990188Tumor susceptibility 101a. (422 aa)    
Predicted Functional Partners:
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.991
vps37b
Zgc:114173.
    
 0.986
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.986
LOC109989575
MABP domain-containing protein.
    
 0.983
vps37a
VPS37A subunit of ESCRT-I.
   
 0.977
rps27a
Ribosomal protein S27a.
    
 0.973
ubb
Ubiquitin B.
    
  0.971
mvb12b
Multivesicular body subunit 12Ba.
    
 0.969
MVB12B
Multivesicular body subunit 12B.
    
 0.969
vps36
Vacuolar protein sorting 36 homolog.
    
 0.965
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.