STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gclcGlutamate-cysteine ligase, catalytic subunit. (630 aa)    
Predicted Functional Partners:
gclm
Glutamate-cysteine ligase, modifier subunit.
   
 0.999
gss
Glutathione synthetase.
   
 0.947
CBS
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.941
cth
Cystathionase (cystathionine gamma-lyase), like.
    
 0.930
LOC109981153
Gamma-glutamyltransferase 1b.
   
 
 0.874
ggt1
Gamma-glutamyltransferase 1a.
   
 
 0.873
LOC109982052
Gamma-glutamyltransferase 5a.
   
 
 0.870
LOC109997155
Uncharacterized protein.
   
 
 0.870
GGT7
Gamma-glutamyltransferase 7.
   
 
 0.864
LOC109976095
Uncharacterized protein.
   
 
 0.864
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.