STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000002628Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
casc1
Cancer susceptibility candidate 1.
   
    0.723
tsr3
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.549
ccdc126
Coiled-coil domain containing 126.
      
 0.507
LOC109987846
NACHT domain-containing protein.
  
     0.450
LOC109995244
Uncharacterized protein.
  
     0.448
mmrn2
Multimerin 2a.
  
 
   0.430
tmtc3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.430
ccdc62
Coiled-coil domain containing 62.
      
 0.403
ENSLBEP00000014218
Uncharacterized protein.
  
     0.402
tsr2
TSR2 ribosome maturation factor.
      
 0.400
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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