STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sra1SRA1 domain-containing protein. (249 aa)    
Predicted Functional Partners:
LOC109993720
D site albumin promoter binding protein b.
    
 
 0.590
LOC109993328
SEC24 homolog C, COPII coat complex component.
    
   0.570
ENSLBEP00000010177
Uncharacterized protein.
      
 0.556
pus1
Pseudouridine synthase 1.
      
 0.549
tmem245
Transmembrane protein 245.
      
 0.546
sec24d
SEC24 homolog D, COPII coat complex component.
    
   0.516
LOC109987341
Matrin 3-like 1.1.
      
 0.507
LOC110000550
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.477
ENSLBEP00000020668
Uncharacterized protein.
      
 0.475
mrps17
Mitochondrial ribosomal protein S17.
   
    0.437
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.